Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 10 protein | D6R52_21335 | Not Available | Positive | 4313927 - 4315246 | 49576.9 |
| diguanylate cyclase | D6R52_21340 | Not Available | Positive | 4315623 - 4317005 | 53196.8 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | D6R52_21345 | Not Available | Positive | 4317006 - 4319429 | 91288.8 |
| d-alanyl-d-alanine dipeptidase | D6R52_21350 | Not Available | Positive | 4319687 - 4320268 | 21242.3 |
| abc transporter substrate-binding protein | D6R52_21355 | Not Available | Positive | 4320282 - 4321832 | 57612.1 |
| abc transporter permease | D6R52_21360 | Not Available | Positive | 4321834 - 4322856 | 37382.3 |
| d,d-dipeptide abc transporter permease | D6R52_21365 | Not Available | Positive | 4322853 - 4323749 | 31942.9 |
| abc transporter atp-binding protein | D6R52_21370 | Not Available | Positive | 4323746 - 4324732 | 36125.1 |
| atp-binding cassette domain-containing protein | D6R52_21375 | Not Available | Positive | 4324725 - 4325651 | 34609.0 |
| peroxiredoxin osmc | D6R52_21380 | Not Available | Negative | 4325707 - 4326138 | 15089.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




