Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | D6R52_21280 | Not Available | Positive | 4301441 - 4302265 | 29741.1 |
| shet2/espl2 family type iii secretion system effector toxin | D6R52_21285 | Not Available | Positive | 4302582 - 4304156 | 60147.4 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | D6R52_21290 | Not Available | Negative | 4304125 - 4305861 | 67674.3 |
| isocitrate lyase | D6R52_21295 | Not Available | Negative | 4306142 - 4307446 | 47524.1 |
| malate synthase a | D6R52_21300 | Not Available | Negative | 4307476 - 4309077 | 60333.1 |
| homoserine o-succinyltransferase | D6R52_21305 | Not Available | Negative | 4309346 - 4310275 | 35701.2 |
| acetyltransferase | D6R52_21310 | Not Available | Positive | 4310432 - 4310875 | 16405.7 |
| hypothetical protein | D6R52_21315 | Not Available | Negative | 4310938 - 4311321 | 14415.7 |
| glutamate decarboxylase | D6R52_21325 | Not Available | Positive | 4311516 - 4312105 | 21932.2 |
| glutamate:gamma-aminobutyrate antiporter | D6R52_21330 | Not Available | Positive | 4312261 - 4313796 | 55080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




