Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D6R52_21175 | Not Available | Negative | 4278172 - 4278909 | 26307.4 |
| yjbf family lipoprotein | D6R52_21180 | Not Available | Negative | 4278906 - 4279544 | 23770.2 |
| hypothetical protein | D6R52_21185 | Not Available | Negative | 4279658 - 4279900 | 7386.46 |
| glucose-6-phosphate isomerase | D6R52_21190 | Not Available | Negative | 4280255 - 4281904 | 61621.1 |
| lysine-sensitive aspartokinase 3 | D6R52_21200 | Not Available | Positive | 4282428 - 4283777 | 48566.6 |
| zeta toxin | D6R52_21205 | Not Available | Positive | 4283922 - 4284848 | 34484.5 |
| nucleotidyltransferase domain-containing protein | D6R52_21210 | Not Available | Negative | 4284884 - 4285675 | 30478.6 |
| slipin family protein | D6R52_21215 | Not Available | Negative | 4285681 - 4286808 | 42363.6 |
| duf3811 domain-containing protein | D6R52_21220 | Not Available | Positive | 4287338 - 4287610 | 10546.7 |
| 23s rrna pseudouridine(2604) synthase rluf | D6R52_21225 | Not Available | Negative | 4287611 - 4288483 | 32448.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




