Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | D6R52_21020 | Not Available | Positive | 4241884 - 4244706 | 103874.0 |
| mmcq/yjbr family dna-binding protein | D6R52_21025 | Not Available | Negative | 4244741 - 4245097 | 13520.2 |
| thiamine phosphate synthase | D6R52_21030 | Not Available | Negative | 4245101 - 4245517 | 15670.8 |
| class b acid phosphatase | D6R52_21035 | Not Available | Negative | 4245628 - 4246341 | 26133.0 |
| hypothetical protein | D6R52_21040 | Not Available | Positive | 4246704 - 4247246 | 20811.7 |
| aromatic amino acid transaminase | D6R52_21045 | Not Available | Negative | 4247468 - 4248661 | 43524.1 |
| alanine racemase biosynthetic | D6R52_21050 | Not Available | Negative | 4248914 - 4249993 | 39155.2 |
| replicative dna helicase | D6R52_21055 | Not Available | Negative | 4250046 - 4251461 | 52393.1 |
| quinone oxidoreductase | D6R52_21060 | Not Available | Positive | 4251544 - 4252527 | 35174.1 |
| envelope stress response protein pspg | D6R52_21065 | Not Available | Negative | 4252693 - 4252935 | 9058.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




