Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycgn family cysteine cluster protein | D6R52_20285 | Not Available | Positive | 4103866 - 4104327 | 17911.3 |
| protein umud | D6R52_20295 | Not Available | Positive | 4105817 - 4106236 | 15064.2 |
| protein umuc | D6R52_20300 | Not Available | Positive | 4106236 - 4107504 | 47682.4 |
| disulfide bond formation protein b | D6R52_20305 | Not Available | Negative | 4107550 - 4108080 | 20161.3 |
| na+/h+ antiporter nhab | D6R52_20310 | Not Available | Negative | 4108226 - 4109767 | 56731.8 |
| fatty acid metabolism transcriptional regulator fadr | D6R52_20315 | Not Available | Positive | 4109988 - 4110707 | 26970.2 |
| spovr family protein | D6R52_20320 | Not Available | Negative | 4110759 - 4112291 | 60803.1 |
| d-amino acid dehydrogenase small subunit | D6R52_20325 | Not Available | Positive | 4112621 - 4113919 | 47610.1 |
| alanine racemase | D6R52_20330 | Not Available | Positive | 4113929 - 4114999 | 38872.9 |
| k+/h+ antiporter nhap2 | D6R52_20335 | Not Available | Negative | 4115385 - 4117121 | 62209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




