Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaba permease | D6R52_19720 | Not Available | Positive | 4004471 - 4005871 | 51083.1 |
| transcriptional regulator | D6R52_19725 | Not Available | Positive | 4005892 - 4006554 | 24992.3 |
| peptidoglycan-binding protein lysm | D6R52_19730 | Not Available | Negative | 4006555 - 4007004 | 16064.0 |
| yqae/pmp3 family membrane protein | D6R52_19735 | Not Available | Negative | 4007088 - 4007246 | 5865.57 |
| transcriptional regulator | D6R52_19740 | Not Available | Positive | 4007429 - 4007728 | 10596.9 |
| rhodanese-like domain-containing protein ygap | D6R52_19745 | Not Available | Positive | 4007738 - 4008262 | 18701.9 |
| dna-binding protein stpa | D6R52_19750 | Not Available | Negative | 4008309 - 4008713 | 15348.4 |
| l-alanine exporter alae | D6R52_19755 | Not Available | Positive | 4009381 - 4009830 | 16950.0 |
| duf2002 family protein | D6R52_19760 | Not Available | Negative | 4009867 - 4010211 | 13066.5 |
| duf883 domain-containing protein | D6R52_19765 | Not Available | Positive | 4010363 - 4010692 | 11847.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




