Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | D6R52_18385 | Not Available | Negative | 3741105 - 3741656 | 20271.5 |
| citrate lyase subunit alpha | D6R52_18390 | Not Available | Negative | 3741660 - 3743192 | 55194.0 |
| citrate lyase subunit beta | D6R52_18395 | Not Available | Negative | 3743203 - 3744111 | 33111.6 |
| citrate lyase acp | D6R52_18400 | Not Available | Negative | 3744108 - 3744404 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | D6R52_18405 | Not Available | Negative | 3744419 - 3745477 | 40079.5 |
| sensor histidine kinase dpib | D6R52_18410 | Not Available | Positive | 3745857 - 3747515 | 61659.7 |
| response regulator | D6R52_18415 | Not Available | Positive | 3747484 - 3748164 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | D6R52_18420 | Not Available | Negative | 3748205 - 3749590 | 48415.3 |
| c4-dicarboxylate abc transporter | D6R52_18425 | Not Available | Negative | 3749635 - 3749736 | 4049.91 |
| phospholipid:lipid a palmitoyltransferase | D6R52_18430 | Not Available | Positive | 3750179 - 3750739 | 21770.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




