Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | D6R52_17585 | Not Available | Negative | 3570825 - 3571817 | 35722.1 |
| xylose isomerase | D6R52_17590 | Not Available | Positive | 3572183 - 3573505 | 49735.7 |
| xylulokinase | D6R52_17595 | Not Available | Positive | 3573577 - 3575031 | 52719.5 |
| hypothetical protein | D6R52_17600 | Not Available | Positive | 3575200 - 3575541 | 12553.0 |
| yiab family inner membrane protein | D6R52_17605 | Not Available | Positive | 3575587 - 3576024 | 16123.6 |
| acyltransferase | D6R52_17610 | Not Available | Negative | 3576066 - 3577061 | 37600.1 |
| hypothetical protein | D6R52_17615 | Not Available | Positive | 3577236 - 3577535 | 11324.8 |
| glycine--trna ligase subunit alpha | D6R52_17620 | Not Available | Positive | 3577630 - 3578541 | 34718.2 |
| glycine--trna ligase subunit beta | D6R52_17625 | Not Available | Positive | 3578551 - 3580620 | 76801.2 |
| hok/gef family protein | D6R52_17630 | Not Available | Positive | 3580946 - 3581098 | 5912.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




