Escherichia coli strain NGCE-33

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NGCE-33 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain demonstrates a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. The optimal growth temperature for NGCE-33 is 37.0°C, which aligns with the physiological temperature of many mammalian hosts, indicating its adaptation to a host-associated habitat. As a member of the diverse E. coli species, strain NGCE-33's ability to thrive in a host-associated environment suggests potential interactions with the host microbiome, contributing to nutrient cycling and metabolic processes. The facultative anaerobic trait further implies that NGCE-33 may play a role in various metabolic pathways, depending on the oxygen availability within its ecological niche. Understanding the specific interactions and metabolic contributions of NGCE-33 within its host environment could provide insights into its functional role in maintaining microbial diversity and stability in the gastrointestinal tract or other associated systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NGCE-33
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain NGCE-33

Accession NumberRBWA00000000.1

Gene Summary

Adenine Count

1195292 bp

Thymine Count

1187071 bp

Guanine Count

1207922 bp

Cytosine Count

1226211 bp

Genome Length

4825635 bp

Protein-coding Genes

4440 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
heme exporter protein cD6R52_01045Not Available+201358 - 20209527886.9
heme exporter protein dD6R52_01050Not Available+202092 - 2023017745.59
cytochrome c-type biogenesis protein ccmeD6R52_01055Not Available+202298 - 20277717699.4
heme lyase ccmf/nrfe family subunitD6R52_01060Not Available+202774 - 20471771407.6
thiol:disulfide interchange proteinD6R52_01065Not Available+204714 - 20527120810.1
cytochrome c-type biogenesis protein ccmhD6R52_01070Not Available+205268 - 20632039091.3
nitrate/nitrite response regulator protein narpD6R52_01075Not Available-206355 - 20700223636.5
autotransporter outer membrane beta-barrel domain-containing proteinD6R52_01080Not Available+207403 - 20969180743.7
Trna-proNot AvailableNot Available+209793 - 209869Not Available
duf3413 domain-containing proteinD6R52_01090Not Available-209944 - 21170467299.8

Displaying genes 341 – 350 of 4682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites