Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system subunit m | D6R52_16210 | Not Available | Positive | 3278243 - 3280681 | 91135.0 |
| restriction endonuclease subunit s | D6R52_16215 | Not Available | Positive | 3280693 - 3282036 | 49823.3 |
| duf4433 domain-containing protein | D6R52_16220 | Not Available | Positive | 3282049 - 3282705 | 25234.9 |
| appr-1-p processing protein | D6R52_16225 | Not Available | Positive | 3282702 - 3283769 | 40675.0 |
| hsdr family type i site-specific deoxyribonuclease | D6R52_16230 | Not Available | Positive | 3283788 - 3286883 | 118378.0 |
| m48 family peptidase | D6R52_16235 | Not Available | Positive | 3286883 - 3287599 | 28513.9 |
| anaerobic c4-dicarboxylate transporter | D6R52_16250 | Not Available | Negative | 3288802 - 3290100 | 45139.0 |
| amino acid racemase | D6R52_16255 | Not Available | Negative | 3290166 - 3290885 | 26292.1 |
| hth-type transcriptional regulator | D6R52_16260 | Not Available | Positive | 3291230 - 3292174 | 35484.1 |
| is200/is605 family transposase | D6R52_16265 | Not Available | Negative | 3292292 - 3292750 | 17965.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




