Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | D6R52_15480 | Not Available | Positive | 3149958 - 3151187 | 45101.9 |
| helix-turn-helix transcriptional regulator | D6R52_15485 | Not Available | Positive | 3151647 - 3152279 | 24445.4 |
| transcriptional regulator | D6R52_15490 | Not Available | Positive | 3152613 - 3153422 | 30838.8 |
| hypothetical protein | D6R52_15495 | Not Available | Positive | 3153415 - 3153897 | 18720.5 |
| hypothetical protein | D6R52_15500 | Not Available | Negative | 3153930 - 3154010 | 3203.84 |
| hypothetical protein | D6R52_15505 | Not Available | Negative | 3154046 - 3154471 | 16286.5 |
| cesd/sycd/lcrh family type iii secretion system chaperone | D6R52_15515 | Not Available | Positive | 3155380 - 3155871 | 19034.1 |
| recombinase | D6R52_15530 | Not Available | Positive | 3157749 - 3158060 | 11722.9 |
| exonuclease | D6R52_15535 | Not Available | Positive | 3158057 - 3158737 | 25875.9 |
| duf1317 family protein | D6R52_15540 | Not Available | Positive | 3158734 - 3158892 | 5974.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




