Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase-dependent protein a | D6R52_15380 | Not Available | Negative | 3127816 - 3128286 | 17866.3 |
| hypothetical protein | D6R52_15385 | Not Available | Positive | 3128296 - 3128478 | 6675.07 |
| thymidylate synthase | D6R52_15390 | Not Available | Negative | 3128471 - 3129265 | 30481.4 |
| prolipoprotein diacylglyceryl transferase | D6R52_15395 | Not Available | Negative | 3129272 - 3130147 | 33109.9 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | D6R52_15400 | Not Available | Negative | 3130298 - 3132544 | 83734.8 |
| rna pyrophosphohydrolase | D6R52_15405 | Not Available | Negative | 3132557 - 3133087 | 20796.0 |
| dna mismatch repair protein muth | D6R52_15410 | Not Available | Positive | 3133772 - 3134461 | 25500.9 |
| terc family protein | D6R52_15415 | Not Available | Positive | 3134530 - 3135243 | 26159.0 |
| ygdi/ygdr family lipoprotein | D6R52_15420 | Not Available | Positive | 3135381 - 3135599 | 7877.35 |
| protein tas | D6R52_15425 | Not Available | Positive | 3135707 - 3136747 | 38501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




