Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase bara | D6R52_15175 | Not Available | Positive | 3079165 - 3081921 | 102487.0 |
| glucarate dehydratase | D6R52_15180 | Not Available | Negative | 3082153 - 3083493 | 49144.9 |
| glucarate dehydratase-related protein | D6R52_15185 | Not Available | Negative | 3083514 - 3084854 | 48940.5 |
| mfs transporter | D6R52_15190 | Not Available | Negative | 3084856 - 3086208 | 49145.0 |
| flavodoxin | D6R52_15195 | Not Available | Negative | 3086643 - 3087092 | 16257.0 |
| trna pseudouridine(65) synthase truc | D6R52_15200 | Not Available | Negative | 3087110 - 3087892 | 29657.4 |
| yqcc family protein | D6R52_15205 | Not Available | Negative | 3087892 - 3088221 | 12787.2 |
| protein syd | D6R52_15210 | Not Available | Negative | 3088843 - 3089388 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D6R52_15215 | Not Available | Positive | 3089456 - 3090304 | 32559.2 |
| log family protein ygdh | D6R52_15220 | Not Available | Positive | 3090416 - 3091780 | 50975.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




