Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | D6R52_15010 | Not Available | Positive | 3043917 - 3044954 | 37887.3 |
| type i-e crispr-associated endoribonuclease cas2 | D6R52_15015 | Not Available | Negative | 3045710 - 3046003 | 11004.4 |
| type i-e crispr-associated endonuclease cas1 | D6R52_15020 | Not Available | Negative | 3046000 - 3046923 | 33440.7 |
| type i-e crispr-associated protein cas6/cse3/case | D6R52_15025 | Not Available | Negative | 3046920 - 3047570 | 24763.6 |
| type i-e crispr-associated protein cas5/casd | D6R52_15030 | Not Available | Negative | 3047552 - 3048298 | 28618.0 |
| type i toxin-antitoxin system hok family toxin | D6R52_15045 | Not Available | Negative | 3051149 - 3051301 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | D6R52_15055 | Not Available | Negative | 3051566 - 3052300 | 28000.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | D6R52_15060 | Not Available | Negative | 3052374 - 3054086 | 63963.8 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | D6R52_15065 | Not Available | Negative | 3054086 - 3055885 | 66283.4 |
| 6-carboxytetrahydropterin synthase qued | D6R52_15070 | Not Available | Positive | 3056201 - 3056566 | 13773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




