Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | D6R52_14240 | Not Available | Positive | 2891650 - 2892168 | 18859.4 |
| hypothetical protein | D6R52_14245 | Not Available | Negative | 2892148 - 2892591 | 16777.2 |
| giy-yig nuclease family protein | D6R52_14250 | Not Available | Positive | 2892642 - 2892944 | 11242.5 |
| n-acetyltransferase | D6R52_14255 | Not Available | Negative | 2892931 - 2893434 | 18534.8 |
| scp2 domain-containing protein | D6R52_14260 | Not Available | Negative | 2893428 - 2893952 | 19686.0 |
| collagenase | D6R52_14265 | Not Available | Positive | 2894161 - 2895156 | 37035.2 |
| u32 family peptidase | D6R52_14270 | Not Available | Positive | 2895165 - 2896043 | 32537.1 |
| llm class flavin-dependent oxidoreductase | D6R52_14275 | Not Available | Positive | 2896249 - 2897256 | 37108.4 |
| tryptophan permease | D6R52_14280 | Not Available | Negative | 2897374 - 2898618 | 44379.2 |
| dead/deah box family atp-dependent rna helicase | D6R52_14285 | Not Available | Negative | 2898772 - 2900661 | 70550.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




