Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | D6R52_13250 | Not Available | Positive | 2687442 - 2690087 | 94664.7 |
| hydrogen peroxide resistance inhibitor ipra | D6R52_13255 | Not Available | Positive | 2690175 - 2690798 | 23957.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | D6R52_13260 | Not Available | Negative | 2690799 - 2691956 | 41882.5 |
| hypothetical protein | D6R52_13265 | Not Available | Positive | 2692094 - 2692288 | 7207.03 |
| peptide antibiotic transporter sbma | D6R52_13270 | Not Available | Positive | 2692308 - 2693528 | 46461.9 |
| duf1615 domain-containing protein | D6R52_13275 | Not Available | Positive | 2693541 - 2694635 | 40371.5 |
| duf2755 family protein | D6R52_13280 | Not Available | Negative | 2694694 - 2695002 | 11425.2 |
| hypothetical protein | D6R52_13285 | Not Available | Negative | 2695075 - 2695263 | 7128.81 |
| duf2754 family protein | D6R52_13290 | Not Available | Positive | 2695262 - 2695474 | 8097.92 |
| d-alanine--d-alanine ligase a | D6R52_13295 | Not Available | Negative | 2695498 - 2696592 | 39318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




