Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein damx | D6R52_12580 | Not Available | Negative | 2540959 - 2542245 | 46108.2 |
| 3-dehydroquinate synthase | D6R52_12585 | Not Available | Negative | 2542337 - 2543425 | 38879.3 |
| shikimate kinase | D6R52_12590 | Not Available | Negative | 2543482 - 2544003 | 19539.2 |
| hypothetical protein | D6R52_12595 | Not Available | Negative | 2544198 - 2544377 | 7231.57 |
| dna transporter hofq | D6R52_12600 | Not Available | Negative | 2544404 - 2545642 | 44776.9 |
| duf2531 family protein | D6R52_12605 | Not Available | Negative | 2545554 - 2545958 | 15099.1 |
| dna utilization protein hofo | D6R52_12610 | Not Available | Negative | 2545948 - 2546388 | 16911.1 |
| dna utilization protein hofn | D6R52_12615 | Not Available | Negative | 2546372 - 2546911 | 20850.2 |
| dna utilization protein hofm | D6R52_12620 | Not Available | Negative | 2546911 - 2547690 | 28970.8 |
| carboxypeptidase/penicillin-binding protein 1a | D6R52_12625 | Not Available | Positive | 2547810 - 2550362 | 93598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




