Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D6R52_12270 | Not Available | Negative | 2480597 - 2482699 | 77250.9 |
| ynce family protein | D6R52_12275 | Not Available | Positive | 2482941 - 2484002 | 38658.2 |
| l-asparagine permease | D6R52_12280 | Not Available | Negative | 2484117 - 2485616 | 54250.3 |
| glutathione s-transferase family protein | D6R52_12285 | Not Available | Positive | 2485883 - 2486500 | 23385.1 |
| hypothetical protein | D6R52_12290 | Not Available | Positive | 2486576 - 2486788 | 8259.59 |
| type vi secretion system tip protein vgrg | D6R52_12295 | Not Available | Positive | 2487609 - 2489717 | 78741.8 |
| rhs repeat protein | D6R52_12300 | Not Available | Positive | 2489785 - 2494005 | 157854.0 |
| hypothetical protein | D6R52_12305 | Not Available | Positive | 2494006 - 2494404 | 15074.2 |
| hypothetical protein | D6R52_12315 | Not Available | Positive | 2495186 - 2495392 | 7908.66 |
| isas1 family transposase | D6R52_12320 | Not Available | Positive | 2495796 - 2496026 | 8913.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




