Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3313 domain-containing protein | D6R52_12155 | Not Available | Positive | 2462113 - 2462781 | 24428.3 |
| transposase | D6R52_12165 | Not Available | Positive | 2463313 - 2464521 | 45745.0 |
| benzoate transporter bene | D6R52_12170 | Not Available | Negative | 2464561 - 2465775 | 42159.8 |
| xre family transcriptional regulator | D6R52_12175 | Not Available | Positive | 2465828 - 2466364 | 19742.4 |
| collagenase-like protease | D6R52_12180 | Not Available | Positive | 2466437 - 2468398 | 72720.0 |
| duf2554 family protein | D6R52_12185 | Not Available | Negative | 2468490 - 2468720 | 8709.32 |
| type ii toxin-antitoxin system hicb family antitoxin | D6R52_12195 | Not Available | Positive | 2469142 - 2469558 | 15217.5 |
| plp-dependent aminotransferase family protein | D6R52_12200 | Not Available | Positive | 2469637 - 2471043 | 52754.7 |
| extracellular solute-binding protein | D6R52_12205 | Not Available | Positive | 2471288 - 2472433 | 42324.4 |
| abc transporter atp-binding protein | D6R52_12210 | Not Available | Positive | 2472451 - 2473464 | 37042.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




