Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | D6R52_11445 | Not Available | Negative | 2309715 - 2310221 | 18985.6 |
| ycie/ycif family protein | D6R52_11450 | Not Available | Negative | 2310267 - 2310767 | 18598.2 |
| hypothetical protein | D6R52_11455 | Not Available | Negative | 2310853 - 2311032 | 6002.69 |
| tryptophan synthase subunit alpha | D6R52_11460 | Not Available | Negative | 2311413 - 2312219 | 28739.8 |
| tryptophan synthase subunit beta | D6R52_11465 | Not Available | Negative | 2312219 - 2313412 | 42985.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | D6R52_11470 | Not Available | Negative | 2313424 - 2314782 | 49345.9 |
| bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase | D6R52_11475 | Not Available | Negative | 2314786 - 2316381 | 56873.4 |
| anthranilate synthase component i | D6R52_11480 | Not Available | Negative | 2316381 - 2317943 | 57594.9 |
| trp operon leader peptide | D6R52_11485 | Not Available | Negative | 2318034 - 2318078 | 1723.19 |
| phosphatase | D6R52_11490 | Not Available | Positive | 2318216 - 2319097 | 32581.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




