Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rbsr | D6R52_11340 | Not Available | Positive | 2287913 - 2288905 | 36587.1 |
| dha2 family efflux mfs transporter permease subunit | D6R52_11345 | Not Available | Negative | 2288871 - 2290298 | 51431.8 |
| fadr family transcriptional regulator | D6R52_11350 | Not Available | Negative | 2290321 - 2291013 | 26063.5 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | D6R52_11355 | Not Available | Negative | 2291642 - 2294317 | 96132.5 |
| naat family transporter yche | D6R52_11360 | Not Available | Positive | 2294794 - 2295441 | 23522.7 |
| oligopeptide abc transporter substrate-binding protein oppa | D6R52_11365 | Not Available | Positive | 2296179 - 2297810 | 60979.1 |
| peptide abc transporter permease | D6R52_11370 | Not Available | Positive | 2297896 - 2298816 | 33445.3 |
| peptide abc transporter permease | D6R52_11375 | Not Available | Positive | 2298831 - 2299739 | 33023.9 |
| abc transporter atp-binding protein | D6R52_11380 | Not Available | Positive | 2299751 - 2300764 | 37148.7 |
| oligopeptide transport atp-binding protein oppf | D6R52_11385 | Not Available | Positive | 2300761 - 2301765 | 37183.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




