Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein soxs | D6R52_10265 | Not Available | Positive | 2077877 - 2078200 | 12911.6 |
| is1 family transposase | D6R52_10275 | Not Available | Negative | 2078937 - 2079048 | 4273.23 |
| sel1 repeat family protein | D6R52_10285 | Not Available | Positive | 2081344 - 2081805 | 17920.4 |
| type iv secretion protein rhs | D6R52_10290 | Not Available | Positive | 2081972 - 2082145 | 6180.5 |
| type iv secretion protein rhs | D6R52_10295 | Not Available | Positive | 2082130 - 2082423 | 10737.6 |
| hypothetical protein | D6R52_10300 | Not Available | Positive | 2082512 - 2082949 | 16094.6 |
| hlyd family secretion protein | D6R52_10305 | Not Available | Negative | 2083409 - 2084545 | 41990.8 |
| duf3302 domain-containing protein | D6R52_10310 | Not Available | Negative | 2084548 - 2084910 | 13882.8 |
| pts mannitol transporter subunit iicba | D6R52_10315 | Not Available | Positive | 2085447 - 2087360 | 68034.5 |
| mannitol-1-phosphate 5-dehydrogenase | D6R52_10320 | Not Available | Positive | 2087590 - 2088738 | 41171.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




