Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | D6R52_00330 | Not Available | Positive | 42191 - 42754 | 19869.3 |
| outer membrane usher protein | D6R52_00335 | Not Available | Positive | 42836 - 45481 | 97505.5 |
| fimbrial protein | D6R52_00340 | Not Available | Positive | 45501 - 46253 | 27679.3 |
| fimbrial protein | D6R52_00345 | Not Available | Positive | 46162 - 46776 | 21320.8 |
| fimbrial protein | D6R52_00350 | Not Available | Positive | 46773 - 47243 | 17021.2 |
| fimbrial protein | D6R52_00355 | Not Available | Positive | 47240 - 47764 | 18259.6 |
| duf2544 domain-containing protein | D6R52_00360 | Not Available | Positive | 47766 - 48623 | 31060.7 |
| endonuclease smrb | D6R52_00365 | Not Available | Negative | 48745 - 49296 | 21014.5 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D6R52_00370 | Not Available | Positive | 49462 - 50394 | 35043.7 |
| chorismate synthase | D6R52_00375 | Not Available | Positive | 50429 - 51514 | 39138.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




