Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | D6R52_09505 | Not Available | Positive | 1928552 - 1929523 | 35998.6 |
| 50s ribosomal protein l9 | D6R52_09510 | Not Available | Negative | 1929635 - 1930084 | 15770.0 |
| 30s ribosomal protein s18 | D6R52_09515 | Not Available | Negative | 1930126 - 1930353 | 8986.94 |
| primosomal replication protein n | D6R52_09520 | Not Available | Negative | 1930358 - 1930672 | 11472.9 |
| 30s ribosomal protein s6 | D6R52_09525 | Not Available | Negative | 1930679 - 1931074 | 15173.8 |
| duf1471 domain-containing protein | D6R52_09530 | Not Available | Positive | 1931403 - 1931678 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | D6R52_09535 | Not Available | Negative | 1931807 - 1932493 | 25309.2 |
| l-ribulose-5-phosphate 3-epimerase ulae | D6R52_09540 | Not Available | Negative | 1932493 - 1933347 | 32050.4 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | D6R52_09545 | Not Available | Negative | 1933357 - 1934007 | 23650.4 |
| pts ascorbate transporter subunit iia | D6R52_09550 | Not Available | Negative | 1934021 - 1934485 | 17212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




