Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | D6R52_09255 | Not Available | Negative | 1874443 - 1874895 | 16924.4 |
| tetr/acrr family transcriptional regulator | D6R52_09260 | Not Available | Negative | 1875040 - 1875633 | 21399.6 |
| sdr family oxidoreductase | D6R52_09265 | Not Available | Positive | 1875704 - 1876417 | 24599.7 |
| rida family protein | D6R52_09270 | Not Available | Positive | 1876548 - 1876943 | 14591.0 |
| pyrbi operon leader peptide | D6R52_09275 | Not Available | Positive | 1877224 - 1877358 | 5098.43 |
| aspartate carbamoyltransferase catalytic subunit | D6R52_09280 | Not Available | Positive | 1877362 - 1878297 | 34429.3 |
| aspartate carbamoyltransferase regulatory subunit | D6R52_09285 | Not Available | Positive | 1878310 - 1878771 | 17121.6 |
| reactive intermediate/imine deaminase | D6R52_09290 | Not Available | Positive | 1878844 - 1879230 | 13612.3 |
| magnesium-translocating p-type atpase | D6R52_09295 | Not Available | Negative | 1879436 - 1882132 | 99444.2 |
| mgta regulatory leader peptide mgtl | D6R52_09300 | Not Available | Negative | 1882273 - 1882326 | 2122.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




