Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | D6R52_09045 | Not Available | Positive | 1828657 - 1829580 | 34284.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | D6R52_09050 | Not Available | Negative | 1829630 - 1830043 | 16082.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | D6R52_09055 | Not Available | Negative | 1830045 - 1831370 | 50768.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | D6R52_09060 | Not Available | Negative | 1831363 - 1833381 | 77416.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | D6R52_09065 | Not Available | Negative | 1833390 - 1835813 | 92279.0 |
| ggdef domain-containing protein | D6R52_09070 | Not Available | Positive | 1836400 - 1837758 | 51800.5 |
| hypothetical protein | D6R52_09075 | Not Available | Negative | 1837799 - 1837895 | 3834.38 |
| is1 family transposase | D6R52_09080 | Not Available | Negative | 1837896 - 1837967 | 2454.95 |
| rna polymerase sigma factor feci | D6R52_09085 | Not Available | Positive | 1838259 - 1838780 | 19481.5 |
| protein fecr | D6R52_09090 | Not Available | Positive | 1838777 - 1839730 | 35534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




