Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 large chain | D6R52_08795 | Not Available | Positive | 1777784 - 1779577 | 66257.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | D6R52_08800 | Not Available | Positive | 1779596 - 1780303 | 27598.8 |
| hydrogenase 1 maturation protease | D6R52_08805 | Not Available | Positive | 1780300 - 1780887 | 21547.7 |
| hydrogenase-1 operon protein hyae | D6R52_08810 | Not Available | Positive | 1780884 - 1781282 | 14871.5 |
| hydrogenase-1 operon protein hyaf | D6R52_08815 | Not Available | Positive | 1781279 - 1782136 | 31432.5 |
| cytochrome bd-ii oxidase subunit 1 | D6R52_08820 | Not Available | Positive | 1782270 - 1783814 | 57996.3 |
| cytochrome bd-ii ubiquinol oxidase subunit 2 | D6R52_08825 | Not Available | Positive | 1783826 - 1784962 | 42427.3 |
| cytochrome bd-ii oxidase subunit cbdx | D6R52_08830 | Not Available | Positive | 1784975 - 1785067 | 3597.68 |
| phytase appa | D6R52_08835 | Not Available | Positive | 1785147 - 1786445 | 47071.6 |
| tyrosine-protein kinase | D6R52_08840 | Not Available | Negative | 1786565 - 1788745 | 81261.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




