Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | D6R52_08440 | Not Available | Negative | 1695805 - 1698087 | 85385.0 |
| formate transporter foca | D6R52_08445 | Not Available | Negative | 1698142 - 1698999 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | D6R52_08450 | Not Available | Negative | 1699405 - 1701165 | 65669.0 |
| duf421 domain-containing protein | D6R52_08455 | Not Available | Positive | 1701295 - 1701987 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D6R52_08460 | Not Available | Positive | 1702186 - 1703274 | 39900.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D6R52_08465 | Not Available | Positive | 1703345 - 1704628 | 46098.5 |
| metalloprotease | D6R52_08470 | Not Available | Positive | 1704797 - 1705561 | 26768.7 |
| cytidylate kinase | D6R52_08475 | Not Available | Positive | 1705734 - 1706417 | 24747.8 |
| 30s ribosomal protein s1 | D6R52_08480 | Not Available | Positive | 1706528 - 1708201 | 61161.5 |
| integration host factor subunit beta | D6R52_08485 | Not Available | Positive | 1708361 - 1708645 | 10651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




