Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybjn domain-containing protein | D6R52_08190 | Not Available | Positive | 1637400 - 1637876 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | D6R52_08195 | Not Available | Positive | 1638227 - 1639339 | 40799.6 |
| putrescine abc transporter atp-binding subunit potg | D6R52_08200 | Not Available | Positive | 1639434 - 1640567 | 41956.3 |
| putrescine abc transporter permease poth | D6R52_08205 | Not Available | Positive | 1640577 - 1641530 | 35534.7 |
| putrescine abc transporter permease poti | D6R52_08210 | Not Available | Positive | 1641527 - 1642372 | 30523.4 |
| duf2593 family protein | D6R52_08215 | Not Available | Positive | 1642432 - 1642920 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | D6R52_08220 | Not Available | Positive | 1642961 - 1644088 | 41963.1 |
| arginine abc transporter substrate-binding protein | D6R52_08225 | Not Available | Negative | 1644263 - 1644994 | 26915.9 |
| arginine abc transporter permease artm | D6R52_08230 | Not Available | Negative | 1645286 - 1645954 | 24915.3 |
| arginine abc transporter permease artq | D6R52_08235 | Not Available | Negative | 1645954 - 1646670 | 26218.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




