Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | D6R52_07430 | Not Available | Positive | 1474905 - 1475525 | 23077.7 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | D6R52_07435 | Not Available | Positive | 1475589 - 1476827 | 46469.8 |
| undecaprenyl-diphosphatase | D6R52_07440 | Not Available | Negative | 1477008 - 1477829 | 29774.7 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | D6R52_07445 | Not Available | Negative | 1477920 - 1478288 | 13620.2 |
| glycerol-3-phosphate acyltransferase | D6R52_07450 | Not Available | Positive | 1478393 - 1479010 | 22194.7 |
| transcriptional activator ttdr | D6R52_07455 | Not Available | Negative | 1479023 - 1479955 | 35316.6 |
| l(+)-tartrate dehydratase subunit alpha | D6R52_07460 | Not Available | Positive | 1480162 - 1481073 | 32664.4 |
| l(+)-tartrate dehydratase subunit beta | D6R52_07465 | Not Available | Positive | 1481070 - 1481675 | 22680.8 |
| anion permease | D6R52_07470 | Not Available | Positive | 1481723 - 1483186 | 52889.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D6R52_07475 | Not Available | Negative | 1483229 - 1484242 | 36010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




