Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hyad/hybd family hydrogenase maturation endopeptidase | D6R52_07115 | Not Available | Negative | 1414695 - 1415189 | 17724.8 |
| hydrogenase-2 large chain | D6R52_07120 | Not Available | Negative | 1415189 - 1416892 | 62494.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | D6R52_07125 | Not Available | Negative | 1416889 - 1418067 | 43604.6 |
| hydrogenase-2 operon protein hyba | D6R52_07130 | Not Available | Negative | 1418057 - 1419043 | 36005.0 |
| hydrogenase-2 small chain | D6R52_07135 | Not Available | Negative | 1419046 - 1420164 | 39654.3 |
| hypothetical protein | D6R52_07140 | Not Available | Negative | 1420171 - 1420356 | 6965.43 |
| duf2623 domain-containing protein | D6R52_07145 | Not Available | Negative | 1420353 - 1420640 | 10946.1 |
| dienelactone hydrolase family protein | D6R52_07150 | Not Available | Negative | 1420759 - 1421685 | 34065.6 |
| l-glyceraldehyde 3-phosphate reductase | D6R52_07155 | Not Available | Positive | 1421803 - 1422843 | 38842.3 |
| tigr00645 family protein | D6R52_07160 | Not Available | Negative | 1422883 - 1423377 | 18642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




