Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | D6R52_06650 | Not Available | Negative | 1324671 - 1324730 | 2179.02 |
| d-3-phosphoglycerate dehydrogenase | D6R52_06655 | Not Available | Negative | 1324959 - 1326191 | 44178.4 |
| ribose-5-phosphate isomerase | D6R52_06660 | Not Available | Negative | 1326447 - 1327106 | 22861.8 |
| hypothetical protein | D6R52_06665 | Not Available | Negative | 1327162 - 1327392 | 8388.54 |
| chromosome initiation inhibitor | D6R52_06670 | Not Available | Positive | 1327534 - 1328427 | 33473.6 |
| methylmalonyl-coa mutase | D6R52_06675 | Not Available | Positive | 1328631 - 1330775 | 77926.6 |
| methylmalonyl co-a mutase-associated gtpase meab | D6R52_06680 | Not Available | Positive | 1330768 - 1331763 | 36735.2 |
| methylmalonyl-coa decarboxylase | D6R52_06685 | Not Available | Positive | 1331774 - 1332559 | 29174.3 |
| acetyl-coa hydrolase/transferase family protein | D6R52_06690 | Not Available | Positive | 1332583 - 1334061 | 53887.6 |
| lysr family transcriptional regulator | D6R52_06695 | Not Available | Negative | 1334058 - 1334954 | 34575.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




