Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D6R52_06385 | Not Available | Negative | 1264831 - 1266483 | 62179.8 |
| Trna-gly | Not Available | Not Available | Positive | 1266675 - 1266748 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | D6R52_06395 | Not Available | Negative | 1266827 - 1267582 | 26594.1 |
| hypothetical protein | D6R52_06400 | Not Available | Negative | 1267579 - 1267770 | 7437.73 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | D6R52_06405 | Not Available | Positive | 1267997 - 1270294 | 82677.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | D6R52_06410 | Not Available | Positive | 1270305 - 1271183 | 31586.7 |
| xanthine dehydrogenase iron-sulfur-binding subunit | D6R52_06415 | Not Available | Positive | 1271180 - 1271659 | 16922.7 |
| sigma-54-dependent fis family transcriptional regulator | D6R52_06420 | Not Available | Negative | 1271699 - 1273477 | 66087.0 |
| knotted carbamoyltransferase ygew | D6R52_06425 | Not Available | Positive | 1273953 - 1275143 | 44189.9 |
| plp-dependent lyase/thiolase | D6R52_06430 | Not Available | Positive | 1275201 - 1276397 | 43330.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




