Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | D6R52_05960 | Not Available | Positive | 1200856 - 1201659 | 29746.6 |
| 4-hydroxy-2-oxoheptanedioate aldolase | D6R52_05965 | Not Available | Positive | 1201652 - 1202458 | 28883.8 |
| 4-hydroxyphenylacetate permease | D6R52_05970 | Not Available | Positive | 1202633 - 1204009 | 50571.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | D6R52_05975 | Not Available | Positive | 1204019 - 1204909 | 34332.0 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | D6R52_05980 | Not Available | Positive | 1205160 - 1206722 | 58868.0 |
| 4-hydroxyphenylacetate 3-monooxygenase reductase component | D6R52_05985 | Not Available | Positive | 1206740 - 1207252 | 18522.7 |
| hypothetical protein | D6R52_05990 | Not Available | Positive | 1207331 - 1207477 | 5279.29 |
| carbon starvation protein a | D6R52_05995 | Not Available | Positive | 1207645 - 1209795 | 77328.5 |
| duf466 domain-containing protein | D6R52_06000 | Not Available | Positive | 1209845 - 1210048 | 7729.24 |
| gtpase | D6R52_06005 | Not Available | Positive | 1210059 - 1211015 | 35668.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




