Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | D6R52_05530 | Not Available | Negative | 1116003 - 1116824 | 28701.3 |
| non-specific ribonucleoside hydrolase rihc | D6R52_05535 | Not Available | Negative | 1116991 - 1117905 | 32547.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D6R52_05540 | Not Available | Negative | 1117971 - 1118921 | 34721.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D6R52_05545 | Not Available | Negative | 1118923 - 1119372 | 16081.9 |
| lipoprotein signal peptidase | D6R52_05550 | Not Available | Negative | 1119497 - 1119991 | 18129.3 |
| isoleucine--trna ligase | D6R52_05555 | Not Available | Negative | 1119991 - 1122807 | 104302.0 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | D6R52_05560 | Not Available | Negative | 1122850 - 1123791 | 34736.4 |
| duf2575 domain-containing protein | D6R52_05565 | Not Available | Negative | 1123799 - 1124017 | 7899.85 |
| 30s ribosomal protein s20 | D6R52_05570 | Not Available | Positive | 1124120 - 1124383 | 9684.94 |
| fimbrial family protein | D6R52_05590 | Not Available | Positive | 1128309 - 1128836 | 19982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




