Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | D6R52_05375 | Not Available | Positive | 1076810 - 1078312 | 56077.2 |
| l-ribulose-5-phosphate 4-epimerase | D6R52_05380 | Not Available | Positive | 1078597 - 1079292 | 25520.3 |
| dna polymerase ii | D6R52_05385 | Not Available | Positive | 1079367 - 1081718 | 90087.6 |
| rna polymerase-associated protein rapa | D6R52_05390 | Not Available | Positive | 1081883 - 1084789 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | D6R52_05395 | Not Available | Positive | 1084801 - 1085460 | 24862.1 |
| pentapeptide repeat-containing protein | D6R52_05405 | Not Available | Negative | 1085868 - 1086689 | 30357.6 |
| molecular chaperone djla | D6R52_05410 | Not Available | Negative | 1086984 - 1087799 | 30581.2 |
| lps-assembly protein lptd | D6R52_05415 | Not Available | Positive | 1088054 - 1090408 | 89689.8 |
| chaperone sura | D6R52_05420 | Not Available | Positive | 1090461 - 1091747 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | D6R52_05425 | Not Available | Positive | 1091747 - 1092736 | 35115.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




