Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein znua | D6R52_04615 | Not Available | Negative | 911031 - 911963 | 33851.3 |
| mn2+/zn2+abc transporter atp-binding protein | D6R52_04620 | Not Available | Positive | 912042 - 912797 | 27869.3 |
| zinc abc transporter permease subunit znub | D6R52_04625 | Not Available | Positive | 912794 - 913579 | 27778.5 |
| holliday junction branch migration dna helicase ruvb | D6R52_04630 | Not Available | Negative | 913726 - 914736 | 37176.0 |
| holliday junction branch migration protein ruva | D6R52_04635 | Not Available | Negative | 914745 - 915356 | 22087.0 |
| hypothetical protein | D6R52_04640 | Not Available | Negative | 915495 - 915560 | 2699.43 |
| yebb family permuted papain-like enzyme | D6R52_04645 | Not Available | Positive | 915631 - 916233 | 22676.2 |
| crossover junction endodeoxyribonuclease ruvc | D6R52_04650 | Not Available | Negative | 916235 - 916756 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | D6R52_04655 | Not Available | Negative | 916791 - 917531 | 26424.0 |
| dihydroneopterin triphosphate diphosphatase | D6R52_04660 | Not Available | Negative | 917560 - 918012 | 17307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




