Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator kdgr | D6R52_04465 | Not Available | Negative | 878688 - 879479 | 29988.1 |
| mfs transporter | D6R52_04470 | Not Available | Positive | 879656 - 881029 | 48154.7 |
| protease htpx | D6R52_04475 | Not Available | Negative | 881075 - 881956 | 31959.3 |
| carboxy terminal-processing peptidase | D6R52_04480 | Not Available | Negative | 882148 - 884196 | 76565.2 |
| rna chaperone proq | D6R52_04485 | Not Available | Negative | 884216 - 884914 | 25863.9 |
| gaf domain-containing protein | D6R52_04490 | Not Available | Negative | 885011 - 885508 | 18066.5 |
| paraquat-inducible membrane protein a | D6R52_04495 | Not Available | Positive | 885638 - 886921 | 48276.3 |
| pqib family protein | D6R52_04500 | Not Available | Positive | 886890 - 889523 | 94931.0 |
| ribosomal rna small subunit methyltransferase f | D6R52_04505 | Not Available | Positive | 889603 - 891042 | 53272.4 |
| duf1480 family protein | D6R52_04510 | Not Available | Positive | 891160 - 891396 | 8753.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




