Pseudomonas amygdali pv. sesami strain ICMP 7459

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. sesami strain ICMP 7459 is a Gram-negative bacterium characterized by its rod shape and mobility. This strain is a specific pathovar of Pseudomonas amygdali, which is known to be associated with various plant diseases. The presence of a single replicon indicates a streamlined genetic structure, which may contribute to its adaptability and potential pathogenicity. The accession number for this strain is RBUZ00000000.1, which is crucial for researchers seeking to access its genomic information and understand its biological functions further. As a member of the Pseudomonas genus, this strain likely possesses traits such as metabolic versatility and the ability to thrive in diverse environments, which are commonly associated with this group of bacteria. From an ecological perspective, the mobility of Pseudomonas amygdali pv. sesami strain ICMP 7459 may facilitate its spread in agricultural settings, potentially affecting crop health and yield. Understanding its traits can aid in the development of management practices for crops susceptible to this pathovar, emphasizing the need for continued research into its ecological relationships and impact on host plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. sesami strain ICMP 7459

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. sesami strain ICMP 7459
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. sesami strain ICMP 7459

Gene Summary

Adenine Count

1267266 bp

Thymine Count

1267851 bp

Guanine Count

1751238 bp

Cytosine Count

1750782 bp

Genome Length

6069225 bp

Protein-coding Genes

5468 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deor family transcriptional regulatorALP04_03372Not AvailableNegative4754175 - 475494527772.3
short chain dehydrogenase/reductase family oxidoreductaseALP04_03373Not AvailableNegative4754985 - 475567123909.1
glycosyl hydrolase, family 43ALP04_03374Not AvailableNegative4755726 - 475685041524.5
sodium/solute symporterALP04_03375Not AvailableNegative4756837 - 475825250703.1
4-hydroxythreonine-4-phosphate dehydrogenaseALP04_03376Not AvailableNegative4758331 - 475936536933.9
type iii effector hrp-dependent outer proteinALP04_100422Not AvailableNegative4759358 - 476061744545.3
iron-containing alcohol dehydrogenaseALP04_03377Not AvailableNegative4760614 - 476178341927.1
4-hydroxy-tetrahydrodipicolinate synthaseALP04_03378Not AvailableNegative4761794 - 476267231221.8
hypothetical proteinALP04_05356Not AvailableNegative4762844 - 476420549577.6
4-hydroxybenzoate 3-monooxygenaseALP04_05357Not AvailableNegative4764466 - 476568045270.2

Displaying genes 4371 – 4380 of 5552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.