Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. sesami strain ICMP 7459 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1267266 bp
Thymine Count
1267851 bp
Guanine Count
1751238 bp
Cytosine Count
1750782 bp
Genome Length
6069225 bp
Protein-coding Genes
5468 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector avre1 | ALP04_04182 | Not Available | Positive | 3648917 - 3652105 | 115428.0 |
| type iii effector avre1 | ALP04_04183 | Not Available | Positive | 3652107 - 3654065 | 70626.1 |
| type iii chaperone protein avrf | ALP04_04184 | Not Available | Negative | 3654114 - 3654503 | 14399.1 |
| effector protein hopm1 | ALP04_04185 | Not Available | Negative | 3654581 - 3656815 | 78179.1 |
| type iii chaperone protein shcm | ALP04_04186 | Not Available | Negative | 3656812 - 3657339 | 19501.2 |
| type iii helper protein hrpw1 | ALP04_04187 | Not Available | Positive | 3657609 - 3658889 | 43951.9 |
| type iii effector hopaa1-1 | ALP04_05505 | Not Available | Negative | 3658976 - 3660436 | 50762.8 |
| hypothetical protein | ALP04_102144 | Not Available | Positive | 3660435 - 3660740 | 10998.1 |
| hypothetical protein | ALP04_04188 | Not Available | Positive | 3660807 - 3661751 | 35190.7 |
| hypothetical protein | ALP04_101537 | Not Available | Negative | 3661791 - 3661919 | 4190.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







