Pseudomonas amygdali pv. sesami strain ICMP 7459

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. sesami strain ICMP 7459 is a Gram-negative bacterium characterized by its rod shape and mobility. This strain is a specific pathovar of Pseudomonas amygdali, which is known to be associated with various plant diseases. The presence of a single replicon indicates a streamlined genetic structure, which may contribute to its adaptability and potential pathogenicity. The accession number for this strain is RBUZ00000000.1, which is crucial for researchers seeking to access its genomic information and understand its biological functions further. As a member of the Pseudomonas genus, this strain likely possesses traits such as metabolic versatility and the ability to thrive in diverse environments, which are commonly associated with this group of bacteria. From an ecological perspective, the mobility of Pseudomonas amygdali pv. sesami strain ICMP 7459 may facilitate its spread in agricultural settings, potentially affecting crop health and yield. Understanding its traits can aid in the development of management practices for crops susceptible to this pathovar, emphasizing the need for continued research into its ecological relationships and impact on host plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. sesami strain ICMP 7459

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. sesami strain ICMP 7459
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. sesami strain ICMP 7459

Gene Summary

Adenine Count

1267266 bp

Thymine Count

1267851 bp

Guanine Count

1751238 bp

Cytosine Count

1750782 bp

Genome Length

6069225 bp

Protein-coding Genes

5468 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulatorALP04_01186Not AvailableNegative3139609 - 314028325330.8
pap2 super proteinALP04_100679Not AvailableNegative3140304 - 314120633819.1
mandelate racemase/muconate lactonizing enzyme proteinALP04_01187Not AvailablePositive3142376 - 314354242775.2
dipeptide abc transporter periplasmic dipeptide-binding proteinALP04_01188Not AvailablePositive3143629 - 314525160127.4
dipeptide abc transporter permease dppbALP04_01189Not AvailablePositive3145256 - 314632938813.1
dipeptide abc transporter permease dppcALP04_01190Not AvailablePositive3146329 - 314723432025.0
dipeptide abc transporter atp-binding proteinALP04_01191Not AvailablePositive3147269 - 314812331797.9
dipeptide abc transporter atp-binding proteinALP04_04835Not AvailablePositive3148011 - 314889832781.6
oligogalacturonate-specific porin protein kdgmALP04_01193Not AvailablePositive3149034 - 314975628233.8
gntr family transcriptional regulatorALP04_04836Not AvailableNegative3149875 - 315069329940.9

Displaying genes 2891 – 2900 of 5552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.