Pseudomonas syringae pv. maculicola strain ICMP 11281

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. maculicola strain ICMP 11281 is characterized by a single replicon and is known to infect specific host plants, including Arabidopsis and Nicotiana tabacum. This strain is part of a larger group of Pseudomonas syringae pathovars, which are notable for their role as plant pathogens. The genomic sequence of this strain is available under the accession number RBUQ00000000.1, which provides insights into its genetic makeup and potential pathogenic mechanisms. The ability of Pseudomonas syringae pv. maculicola to infect Arabidopsis and Nicotiana tabacum highlights its significance in plant pathology research, particularly in understanding host-pathogen interactions. From an ecological perspective, the relationship between Pseudomonas syringae pv. maculicola and its host plants plays a crucial role in the dynamics of plant disease in agricultural settings. The presence of this pathogen can affect crop yields and influence plant community structures. Understanding the specific interactions between this strain and its hosts can inform disease management strategies and contribute to the broader field of plant microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. maculicola strain ICMP 11281
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Arabidopsis, Nicotiana tabacum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. maculicola strain ICMP 11281

Gene Summary

Adenine Count

1313199 bp

Thymine Count

1315542 bp

Guanine Count

1848444 bp

Cytosine Count

1841410 bp

Genome Length

6345326 bp

Protein-coding Genes

5614 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductase, fad-bindingALP13_04902Not AvailablePositive2906372 - 290827970465.2
dienelactone hydrolase proteinALP13_04903Not AvailableNegative2908389 - 290927632275.2
ggdef domain proteinALP13_02654Not AvailablePositive2909491 - 291037233047.6
diguanylate cyeALP13_04904Not AvailablePositive2910439 - 29105493836.7
regulatory protein, lysr:lysr, substrate-bindingALP13_100355Not AvailablePositive2910609 - 291160736018.3
hypothetical proteinALP13_04905Not AvailablePositive2911954 - 291341453293.5
peptide abc transporter permeaseALP13_100203Not AvailablePositive2913411 - 291438536058.8
dipeptide/oligopeptide/nickel abc-type transport systemALP13_100220Not AvailablePositive2914382 - 291530233119.7
oligopeptide/dipeptide abc transporter, atp-binding proteinALP13_04906Not AvailablePositive2916179 - 291682623950.2
hypothetical proteinALP13_04844Not AvailablePositive2917062 - 29171663816.5

Displaying genes 2691 – 2700 of 5800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.