Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | strain ICMP 11895 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Actinidia deliciosa, Actinidia chinensis, Olea europaea |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1216104 bp
Thymine Count
1203988 bp
Guanine Count
1678833 bp
Cytosine Count
1686620 bp
Genome Length
5821613 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | ALP15_00349 | Not Available | Positive | 1129632 - 1130126 | 18162.5 |
| effector protein hopm1 | ALP15_00350 | Not Available | Positive | 1130335 - 1132356 | 71135.8 |
| avirulence protein avrf | ALP15_00351 | Not Available | Positive | 1132434 - 1132823 | 14339.1 |
| type iii effector | ALP15_04360 | Not Available | Negative | 1132872 - 1134880 | 72463.3 |
| type iii effector avre1 | ALP15_00353 | Not Available | Negative | 1134866 - 1138075 | 115394.0 |
| hrp-associated lytic transglycosylase | ALP15_00354 | Not Available | Positive | 1138249 - 1139712 | 53477.9 |
| type iii transcriptional regulator hrpr | ALP15_00355 | Not Available | Positive | 1140795 - 1141715 | 34315.8 |
| type iii secretion system transcriptional regulator | ALP15_00356 | Not Available | Positive | 1141766 - 1142674 | 33270.3 |
| type iii secretion system pilin protein | ALP15_00357 | Not Available | Positive | 1142766 - 1143092 | 11134.9 |
| hrpz | ALP15_00358 | Not Available | Positive | 1143143 - 1144183 | 35321.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Olive knot | Causes | PMC10420344 |
| Olive knot disease | Causes | PMC10420344 |
| Olive knot disease | Causes | PMC6638699 |
| Bacterial canker of kiwifruit | Causes | PMC8815115 |
| Disease of the ornamental plant mandevilla spp. | Causes | PMC8815115 |
| Bacterial canker | Causes | PMC8815115 |
| Bacterial canker disease | Causes | PMC8815115 |







