Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase, hamp region: chemotaxis sensory transducer | ALP24_03288 | Not Available | Negative | 827331 - 827688 | 12673.8 |
| bcct transporter | ALP24_01705 | Not Available | Negative | 827761 - 829755 | 73227.2 |
| urocanate hydratase | ALP24_01706 | Not Available | Positive | 830345 - 832063 | 62643.2 |
| histidine abc-type transport system, periplasmic substrate-binding protein | ALP24_01707 | Not Available | Positive | 832177 - 833145 | 35073.2 |
| dna internalization-related competence protein comec/rec2 | ALP24_05063 | Not Available | Positive | 833178 - 834711 | 55859.7 |
| mota/tolq/exbb proton channel | ALP24_02603 | Not Available | Positive | 834788 - 835474 | 24527.4 |
| biopolymer transport protein exbd/tolr family | ALP24_100142 | Not Available | Positive | 835471 - 835902 | 15618.8 |
| tetraacyldisaccharide 4'-kinase | ALP24_02604 | Not Available | Positive | 835902 - 836231 | 11857.7 |
| tetraacyldisaccharide 4'-kinase | ALP24_02605 | Not Available | Positive | 836231 - 836848 | 22667.9 |
| tetraacyldisaccharide 4'-kinase | ALP24_02606 | Not Available | Positive | 836866 - 837051 | 6602.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









