Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | ALP24_01970 | Not Available | Negative | 726067 - 726576 | 18995.1 |
| peptidoglycan-binding lysm | ALP24_04900 | Not Available | Positive | 726672 - 727727 | 38665.4 |
| hypothetical protein | ALP24_01972 | Not Available | Positive | 727851 - 728057 | 7244.86 |
| smf protein | ALP24_01973 | Not Available | Positive | 728111 - 728968 | 29712.9 |
| threonylcarbamoyl-amp synthase | ALP24_01974 | Not Available | Positive | 729007 - 729474 | 16427.6 |
| quinone oxidoreductase | ALP24_01975 | Not Available | Negative | 729552 - 730238 | 24117.2 |
| oxygen-dependent coproporphyrinogen-iii oxidase | ALP24_01976 | Not Available | Positive | 730714 - 731628 | 34597.4 |
| shikimate dehydrogenase | ALP24_01977 | Not Available | Positive | 731628 - 732452 | 29415.2 |
| hypothetical protein | ALP24_04116 | Not Available | Positive | 734112 - 734357 | 8973.58 |
| hypothetical protein | ALP24_04117 | Not Available | Positive | 734354 - 734563 | 7353.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









