Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | ALP24_04789 | Not Available | Negative | 572700 - 574496 | 66249.2 |
| peptidase s1, chymotrypsin:pdz/dhr/glgf | ALP24_04790 | Not Available | Negative | 574668 - 576149 | 51992.6 |
| sigma factor algu negative regulatory protein mucb | ALP24_01560 | Not Available | Negative | 576398 - 577357 | 34727.4 |
| anti sigma-e protein, rsea | ALP24_01561 | Not Available | Negative | 577366 - 577956 | 20727.5 |
| rna polymerase sigma factor | ALP24_04793 | Not Available | Negative | 577990 - 578586 | 22124.2 |
| l-aspartate oxidase | ALP24_101254 | Not Available | Positive | 579046 - 580719 | 62053.5 |
| sdh5 super protein | ALP24_01562 | Not Available | Negative | 581141 - 581395 | 10328.5 |
| hypothetical protein | ALP24_01563 | Not Available | Positive | 581542 - 582489 | 34216.1 |
| putative signal transduction protein | ALP24_01564 | Not Available | Positive | 582601 - 583422 | 30382.9 |
| tricarboxylate transport system regulating sensor histidine kinase tcte | ALP24_04794 | Not Available | Negative | 583590 - 584990 | 51255.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









