Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00641 | Not Available | Positive | 541210 - 541515 | 11473.7 |
| hypothetical protein | ALP24_100383 | Not Available | Positive | 541512 - 541712 | 7315.72 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ALP24_00642 | Not Available | Positive | 541737 - 542423 | 25213.0 |
| glucoamylase-related glycosyl hydrolase | ALP24_00643 | Not Available | Negative | 542424 - 544241 | 67122.1 |
| cof-like hydrolase | ALP24_00644 | Not Available | Negative | 544293 - 545102 | 29300.7 |
| glucose-6-phosphate 1-dehydrogenase | ALP24_00645 | Not Available | Negative | 545095 - 546306 | 45549.8 |
| 6-phosphogluconate dehydrogenase-like protein | ALP24_00646 | Not Available | Negative | 546611 - 547666 | 38361.5 |
| hypothetical protein | ALP24_00647 | Not Available | Positive | 547900 - 548073 | 6433.97 |
| gnat family acetyltransferase | ALP24_00648 | Not Available | Negative | 548233 - 548730 | 18314.3 |
| glycogen synthase | ALP24_00649 | Not Available | Positive | 549340 - 550938 | 58295.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









