Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s ferredoxin | ALP24_03857 | Not Available | Positive | 516977 - 517318 | 12327.5 |
| hypothetical protein | ALP24_03858 | Not Available | Positive | 517327 - 517533 | 7784.39 |
| nucleoside diphosphate kinase | ALP24_03859 | Not Available | Positive | 517630 - 518055 | 14951.7 |
| dual-specificity rna methyltransferase rlmn | ALP24_05427 | Not Available | Positive | 518074 - 519198 | 39456.7 |
| type iv pilus bioproteinsis/stability protein pilw | ALP24_03860 | Not Available | Positive | 519225 - 519983 | 28737.2 |
| putative membrane protein | ALP24_03861 | Not Available | Positive | 519983 - 520993 | 35037.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | ALP24_03862 | Not Available | Positive | 520997 - 522106 | 39754.1 |
| histidine--trna ligase | ALP24_03863 | Not Available | Positive | 522129 - 523418 | 47816.5 |
| hypothetical protein | ALP24_03864 | Not Available | Positive | 523458 - 524099 | 22847.1 |
| outer membrane protein assembly factor bamb | ALP24_03865 | Not Available | Positive | 524092 - 525246 | 40930.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









