Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_02576 | Not Available | Positive | 5838540 - 5839108 | 20772.8 |
| aldehyde-dismutating formaldehyde dehydrogenase | ALP24_02577 | Not Available | Negative | 5839164 - 5840423 | 44173.2 |
| formyltetrahydrofolate deformylase | ALP24_100111 | Not Available | Negative | 5840472 - 5841329 | 32142.4 |
| sarcosine oxidase, gamma subunit, heterotetrameric | ALP24_02578 | Not Available | Negative | 5841527 - 5842159 | 23121.7 |
| sarcosine oxidase subunit alpha | ALP24_05059 | Not Available | Negative | 5842210 - 5845542 | 120907.0 |
| hypothetical protein | ALP24_101616 | Not Available | Negative | 5845558 - 5846224 | 23388.2 |
| sarcosine oxidase, beta subunit | ALP24_02580 | Not Available | Negative | 5846090 - 5846800 | 25874.7 |
| serine hydroxymethyltransferase | ALP24_02581 | Not Available | Negative | 5846818 - 5848068 | 44178.6 |
| glycine/betaine/l-proline abc transporter, atp-binding subunit | ALP24_102413 | Not Available | Negative | 5848329 - 5849507 | 43338.8 |
| hypothetical protein | ALP24_02582 | Not Available | Negative | 5849504 - 5850346 | 29581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









