Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00206 | Not Available | Positive | 499387 - 499743 | 13447.0 |
| flagellar hook-length control protein | ALP24_00207 | Not Available | Positive | 499856 - 501268 | 47839.0 |
| exchangeable effector locus protein | ALP24_03845 | Not Available | Positive | 501704 - 502126 | 14779.2 |
| hypothetical protein | ALP24_03846 | Not Available | Negative | 502285 - 502695 | 15579.3 |
| Trna-leu | Not Available | Not Available | Positive | 502861 - 502945 | Not Available |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ALP24_03847 | Not Available | Positive | 503063 - 504127 | 38714.1 |
| queuine trna-ribosyltransferase | ALP24_100272 | Not Available | Positive | 504124 - 505257 | 41717.7 |
| preprotein translocase, subunit yajc | ALP24_03848 | Not Available | Positive | 505311 - 505646 | 11826.5 |
| protein translocase subunit secd | ALP24_03849 | Not Available | Positive | 505695 - 507563 | 67406.5 |
| protein-export membrane protein secf | ALP24_03850 | Not Available | Positive | 507573 - 508484 | 33001.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









